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POLR2L RNA polymerase II, I and III subunit L [ Corvus cornix cornix ]

Gene ID: 104689917, updated on 3-Aug-2024

Summary

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Gene symbol
POLR2L
Gene description
RNA polymerase II, I and III subunit L
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See POLR2L in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 5 NC_046335.1 (45839884..45843393, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010958889.1 (7295846..7299143)

Chromosome 5 - NC_046335.1Genomic Context describing neighboring genes Neighboring gene calcium release activated channel regulator 2B Neighboring gene CD151 molecule (Raph blood group) Neighboring gene tetraspanin 4 Neighboring gene uncharacterized LOC120410137 Neighboring gene chitinase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I, II, and III subunit RPABC5
Names
RNA polymerase II subunit L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046335.1 Reference ASM73873v5 Primary Assembly

    Range
    45839884..45843393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039553307.1 → XP_039409241.1  DNA-directed RNA polymerases I, II, and III subunit RPABC5

    Conserved Domains (1) summary
    pfam01194
    Location:1 → 59
    RNA_pol_N; RNA polymerases N / 8 kDa subunit

  2. XM_039553306.1 → XP_039409240.1  DNA-directed RNA polymerases I, II, and III subunit RPABC5

    Conserved Domains (1) summary
    pfam01194
    Location:1 → 59
    RNA_pol_N; RNA polymerases N / 8 kDa subunit

  3. XM_039553308.1 → XP_039409242.1  DNA-directed RNA polymerases I, II, and III subunit RPABC5

    Conserved Domains (1) summary
    pfam01194
    Location:1 → 59
    RNA_pol_N; RNA polymerases N / 8 kDa subunit
Nucleotide Protein
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