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TMCO3 transmembrane and coiled-coil domains 3 [ Corvus cornix cornix ]

Gene ID: 104686105, updated on 3-Aug-2024

Summary

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Gene symbol
TMCO3
Gene description
transmembrane and coiled-coil domains 3
See related
EnsemblRapid:ENSCCCG00025016633
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See TMCO3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 1 NC_046332.1 (91881477..91914250, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959319.1 (21531184..21561212, complement)

Chromosome 1 - NC_046332.1Genomic Context describing neighboring genes Neighboring gene ATPase H+/K+ transporting subunit beta Neighboring gene transcription factor Dp-1 Neighboring gene defective in cullin neddylation 1 domain containing 2 Neighboring gene ADP-ribosylhydrolase like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables potassium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and coiled-coil domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046332.1 Reference ASM73873v5 Primary Assembly

    Range
    91881477..91914250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039549642.1 → XP_039405576.1  transmembrane and coiled-coil domain-containing protein 3 isoform X1

    Related
    ENSCCCP00025028205.1, ENSCCCT00025034506.1
    Conserved Domains (2) summary
    COG1196
    Location:62 → 254
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam00999
    Location:275 → 646
    Na_H_Exchanger; Sodium/hydrogen exchanger family

  2. XM_039549647.1 → XP_039405581.1  transmembrane and coiled-coil domain-containing protein 3 isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:62 → 254
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam00999
    Location:275 → 566
    Na_H_Exchanger; Sodium/hydrogen exchanger family

  3. XM_039549653.1 → XP_039405587.1  transmembrane and coiled-coil domain-containing protein 3 isoform X3

    Conserved Domains (2) summary
    COG1196
    Location:62 → 254
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam00999
    Location:275 → 565
    Na_H_Exchanger; Sodium/hydrogen exchanger family
Nucleotide Protein
Heading Accession and Version

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