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RPRD1A regulation of nuclear pre-mRNA domain containing 1A [ Corvus cornix cornix ]

Gene ID: 104685917, updated on 3-Aug-2024

Summary

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Gene symbol
RPRD1A
Gene description
regulation of nuclear pre-mRNA domain containing 1A
See related
EnsemblRapid:ENSCCCG00025014642
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 2 NC_046333.1 (86651774..86695916)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959308.1 (8939553..8984737, complement)

Chromosome 2 - NC_046333.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109143846 Neighboring gene formin homology 2 domain containing 3 Neighboring gene uncharacterized LOC104685854 Neighboring gene chromosome 2 C18orf21 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II C-terminal domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, holoenzyme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulation of nuclear pre-mRNA domain-containing protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046333.1 Reference ASM73873v5 Primary Assembly

    Range
    86651774..86695916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039550179.1 → XP_039406113.1  regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1

    Related
    ENSCCCP00025025347.1, ENSCCCT00025030259.1
    Conserved Domains (2) summary
    cd17011
    Location:4 → 131
    CID_RPRD1A; CID (CTD-Interacting Domain) of Regulation of nuclear pre-mRNA domain-containing protein 1A
    pfam16566
    Location:164 → 309
    CREPT; Cell-cycle alteration and expression-elevated protein in tumor

  2. XM_039550180.1 → XP_039406114.1  regulation of nuclear pre-mRNA domain-containing protein 1A isoform X2

    Related
    ENSCCCP00025025340.1, ENSCCCT00025030250.1
    Conserved Domains (2) summary
    cd17011
    Location:4 → 131
    CID_RPRD1A; CID (CTD-Interacting Domain) of Regulation of nuclear pre-mRNA domain-containing protein 1A
    pfam16566
    Location:164 → 262
    CREPT; Cell-cycle alteration and expression-elevated protein in tumor
Nucleotide Protein
Heading Accession and Version

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