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MCC MCC regulator of WNT signaling pathway [ Corvus cornix cornix ]

Gene ID: 104684170, updated on 3-Aug-2024

Summary

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Gene symbol
MCC
Gene description
MCC regulator of WNT signaling pathway
See related
EnsemblRapid:ENSCCCG00025014276
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See MCC in Genome Data Viewer
Location:
chromosome: Z
Exon count:
22
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) Z NC_046357.1 (66981466..67168027)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959224.1 (17246..188289)

Chromosome Z - NC_046357.1Genomic Context describing neighboring genes Neighboring gene synaptic vesicle glycoprotein 2C Neighboring gene 3'-5' RNA helicase YTHDC2-like Neighboring gene decapping mRNA 2 Neighboring gene receptor accessory protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
colorectal mutant cancer protein
Names
MCC, WNT signaling pathway regulator
mutated in colorectal cancers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046357.1 Reference ASM73873v5 Primary Assembly

    Range
    66981466..67168027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039567614.1 → XP_039423548.1  colorectal mutant cancer protein isoform X1

    Related
    ENSCCCP00025024817.1, ENSCCCT00025029602.1
    Conserved Domains (3) summary
    COG1196
    Location:174 → 996
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam10506
    Location:579 → 643
    MCC-bdg_PDZ; PDZ domain of MCC-2 bdg protein for Usher syndrome
    pfam13499
    Location:25 → 81
    EF-hand_7; EF-hand domain pair

  2. XM_039567615.1 → XP_039423549.1  colorectal mutant cancer protein isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:54 → 876
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam10506
    Location:459 → 523
    MCC-bdg_PDZ; PDZ domain of MCC-2 bdg protein for Usher syndrome

  3. XM_010391361.4 → XP_010389663.1  colorectal mutant cancer protein isoform X4

    Related
    ENSCCCP00025024784.1, ENSCCCT00025029561.1
    Conserved Domains (1) summary
    pfam10506
    Location:400 → 463
    MCC-bdg_PDZ; PDZ domain of MCC-2 bdg protein for Usher syndrome

  4. XM_010391360.4 → XP_010389662.1  colorectal mutant cancer protein isoform X3

    Related
    ENSCCCP00025024773.1, ENSCCCT00025029545.1
    Conserved Domains (2) summary
    COG1196
    Location:30 → 828
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam10506
    Location:411 → 474
    MCC-bdg_PDZ; PDZ domain of MCC-2 bdg protein for Usher syndrome

  5. XM_010391362.4 → XP_010389664.1  colorectal mutant cancer protein isoform X5

    Related
    ENSCCCP00025024750.1, ENSCCCT00025029510.1
    Conserved Domains (1) summary
    pfam10506
    Location:384 → 447
    MCC-bdg_PDZ; PDZ domain of MCC-2 bdg protein for Usher syndrome
Nucleotide Protein
Heading Accession and Version

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