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COLEC11 collectin subfamily member 11 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104658020, updated on 12-Mar-2024

Summary

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Gene symbol
COLEC11
Gene description
collectin subfamily member 11
See related
Ensembl:ENSRROG00000029962
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 17 NC_044565.1 (53184424..53234100, complement)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010830444.1 (1336682..1383978)

Chromosome 17 - NC_044565.1Genomic Context describing neighboring genes Neighboring gene doublecortin domain containing 2C Neighboring gene allantoicase Neighboring gene ribosomal protein S7 Neighboring gene ribonuclease H1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044565.1 Reference ASM756505v1 Primary Assembly

    Range
    53184424..53234100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010357912.2 → XP_010356214.1  collectin-11 isoform X1

    UniProtKB/TrEMBL
    A0A2K6P3V4, A0A2K6P3W8
    Related
    ENSRROP00000011217.1
    Conserved Domains (2) summary
    cd03591
    Location:184 → 299
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:77 → 130
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_010357914.2 → XP_010356216.1  collectin-11 isoform X2

    See identical proteins and their annotated locations for XP_010356216.1

    UniProtKB/TrEMBL
    A0A2K6P3W1, A0A2K6P3Y2
    Related
    ENSRROP00000011219.1
    Conserved Domains (2) summary
    cd03591
    Location:151 → 266
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:41 → 95
    Collagen; Collagen triple helix repeat (20 copies)

  3. XM_010357913.2 → XP_010356215.1  collectin-11 isoform X2

    See identical proteins and their annotated locations for XP_010356215.1

    UniProtKB/TrEMBL
    A0A2K6P3W1, A0A2K6P3Y2
    Conserved Domains (2) summary
    cd03591
    Location:151 → 266
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:41 → 95
    Collagen; Collagen triple helix repeat (20 copies)

  4. XM_030921815.1 → XP_030777675.1  collectin-11 isoform X3

    Conserved Domains (2) summary
    cd03591
    Location:115 → 230
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:8 → 61
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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