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CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component [ Balearica regulorum gibbericeps (East African grey crowned-crane) ]

Gene ID: 104644096, updated on 3-Aug-2024

Summary

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Gene symbol
CTR9
Gene description
CTR9 homolog, Paf1/RNA polymerase II complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Balearica regulorum gibbericeps (sub-species: gibbericeps)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Balearica
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current ASM70989v1 (GCF_000709895.1) Unplaced Scaffold NW_010742303.1 (22..21159)

NW_010742303.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010742303.1 Unplaced Scaffold Reference ASM70989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Balearica regulorum gibbericeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70989v1 Primary Assembly

Genomic

  1. NW_010742303.1 Reference ASM70989v1 Primary Assembly

    Range
    22..21159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010313610.1 → XP_010311912.1  LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog

    Conserved Domains (5) summary
    TIGR02795
    Location:311 → 421
    tol_pal_ybgF; tol-pal system protein YbgF
    sd00006
    Location:502 → 526
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:165 → 229
    TPR_11; TPR repeat
    pfam13424
    Location:499 → 564
    TPR_12; Tetratricopeptide repeat
    pfam15315
    Location:1061 → 1154
    FRG2; Facioscapulohumeral muscular dystrophy candidate 2
Nucleotide Protein
Heading Accession and Version

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