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BTRC beta-transducin repeat containing E3 ubiquitin protein ligase [ Phaethon lepturus (White-tailed tropicbird) ]

Gene ID: 104614773, updated on 3-Aug-2024

Summary

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Gene symbol
BTRC
Gene description
beta-transducin repeat containing E3 ubiquitin protein ligase
Locus tag
N335_04145
Gene type
protein coding
RefSeq status
MODEL
Organism
Phaethon lepturus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Phaethontimorphae; Phaethontiformes; Phaethontidae; Phaethon
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM68728v1 (GCF_000687285.1) Unplaced Scaffold NW_010514251.1 (7544..27391, complement)

NW_010514251.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010514251.1 Unplaced Scaffold Reference ASM68728v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/WD repeat-containing protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phaethon lepturus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68728v1

Genomic

  1. NW_010514251.1 Reference ASM68728v1

    Range
    7544..27391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010292473.1 → XP_010290775.1  F-box/WD repeat-containing protein 1A

    Conserved Domains (4) summary
    COG2319
    Location:116 → 418
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:129 → 407
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12937
    Location:6 → 54
    F-box-like; F-box-like
    sd00039
    Location:132 → 167
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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