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EFEMP1 EGF containing fibulin extracellular matrix protein 1 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104571121, updated on 12-Mar-2024

Summary

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Gene symbol
EFEMP1
Gene description
EGF containing fibulin extracellular matrix protein 1
Locus tag
N309_10731
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010583992.1 (903050..963611)

NW_010583992.1Genomic Context describing neighboring genes Neighboring gene H2.0 like homeobox Neighboring gene dual specificity phosphatase 10 Neighboring gene polyribonucleotide nucleotidyltransferase 1 Neighboring gene protein phosphatase 4 regulatory subunit 3B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010583992.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF-containing fibulin-like extracellular matrix protein 1
Names
EGF containing fibulin like extracellular matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010583992.1 Reference ASM70537v2

    Range
    903050..963611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010218185.1 → XP_010216487.1  EGF-containing fibulin-like extracellular matrix protein 1

    UniProtKB/TrEMBL
    A0A099ZB69
    Conserved Domains (3) summary
    smart00179
    Location:213 → 252
    EGF_CA; Calcium-binding EGF-like domain
    pfam07645
    Location:132 → 169
    EGF_CA; Calcium-binding EGF domain
    cl00057
    Location:171 → 210
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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