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VPS35 VPS35 retromer complex component [ Colius striatus (speckled mousebird) ]

Gene ID: 104550302, updated on 3-Aug-2024

Summary

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Gene symbol
VPS35
Gene description
VPS35 retromer complex component
Locus tag
N325_08991
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See VPS35 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 14 NC_084772.1 (9662306..9684721)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010673704.1 (5095..21810, complement)

Chromosome 14 - NC_084772.1Genomic Context describing neighboring genes Neighboring gene myosin light chain kinase 3 Neighboring gene origin recognition complex subunit 6 Neighboring gene histamine H3 receptor-like Neighboring gene SHC binding and spindle associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer, cargo-selective complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 35
Names
Vacuolar protein sorting-associated protein 35

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084772.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    9662306..9684721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062007242.1 → XP_061863226.1  vacuolar protein sorting-associated protein 35

Nucleotide Protein
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