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STXBP5 syntaxin binding protein 5 [ Antrostomus carolinensis (chuck-will's-widow) ]

Gene ID: 104532188, updated on 3-Aug-2024

Summary

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Gene symbol
STXBP5
Gene description
syntaxin binding protein 5
Locus tag
N321_01677
Gene type
protein coding
RefSeq status
MODEL
Organism
Antrostomus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Antrostomus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM70074v1 (GCF_000700745.1) Unplaced Scaffold NW_010293564.1 (5138..55724)

NW_010293564.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010293564 Unplaced Scaffold Reference ASM70074v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin II binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-binding protein 5
Names
Syntaxin-binding protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Antrostomus carolinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70074v1

Genomic

  1. NW_010293564.1 Reference ASM70074v1

    Range
    5138..55724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029087298.1 → XP_028943131.1  syntaxin-binding protein 5

    UniProtKB/TrEMBL
    A0A094KP23
    Conserved Domains (4) summary
    COG2319
    Location:1 → 297
    WD40; WD40 repeat [General function prediction only]
    cd15893
    Location:852 → 912
    R-SNARE_STXBP5; SNARE domain of STXBP5
    sd00039
    Location:3 → 40
    7WD40; WD40 repeat [structural motif]
    pfam08366
    Location:38 → 145
    LLGL; LLGL2
Nucleotide Protein
Heading Accession and Version

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