U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component [ Antrostomus carolinensis (chuck-will's-widow) ]

Gene ID: 104525193, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
CTR9
Gene description
CTR9 homolog, Paf1/RNA polymerase II complex component
Locus tag
N321_09393
Gene type
protein coding
RefSeq status
MODEL
Organism
Antrostomus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Antrostomus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM70074v1 (GCF_000700745.1) Unplaced Scaffold NW_010316420.1 (25275..45865, complement)

NW_010316420.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4 gamma 2 Neighboring gene small nucleolar RNA SNORD97

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010316420 Unplaced Scaffold Reference ASM70074v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
RNA polymerase-associated protein CTR9 homolog
Names
RNA polymerase-associated protein CTR9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Antrostomus carolinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70074v1

Genomic

  1. NW_010316420.1 Reference ASM70074v1

    Range
    25275..45865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010168272.1 → XP_010166574.1  RNA polymerase-associated protein CTR9 homolog

    UniProtKB/TrEMBL
    A0A094MVR1
    Conserved Domains (5) summary
    TIGR02795
    Location:303 → 413
    tol_pal_ybgF; tol-pal system protein YbgF
    sd00006
    Location:494 → 518
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:639 → 702
    TPR_11; TPR repeat
    pfam13424
    Location:491 → 556
    TPR_12; Tetratricopeptide repeat
    pfam15315
    Location:1053 → 1146
    FRG2; Facioscapulohumeral muscular dystrophy candidate 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.