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SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [ Antrostomus carolinensis (chuck-will's-widow) ]

Gene ID: 104521127, updated on 3-Aug-2024

Summary

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Gene symbol
SVEP1
Gene description
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Antrostomus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Antrostomus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
43
Annotation release Status Assembly Chr Location
101 current ASM70074v1 (GCF_000700745.1) Unplaced Scaffold NW_010300159.1 (413..93208, complement)

NW_010300159.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010300159 Unplaced Scaffold Reference ASM70074v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Antrostomus carolinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70074v1

Genomic

  1. NW_010300159.1 Reference ASM70074v1

    Range
    413..93208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010163031.2 → XP_010161333.2  sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

    Conserved Domains (10) summary
    cd00033
    Location:261 → 317
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02927
    Location:2209 → 2439
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:1100 → 1136
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam02494
    Location:383 → 465
    HYR; HYR domain
    pfam07699
    Location:943 → 990
    Ephrin_rec_like; Putative ephrin-receptor like
    pfam12947
    Location:1580 → 1614
    EGF_3; EGF domain
    pfam00008
    Location:1028 → 1056
    EGF; EGF-like domain
    pfam00092
    Location:1 → 81
    VWA; von Willebrand factor type A domain
    cl03620
    Location:466 → 545
    DUF5011; Domain of unknown function (DUF5011)
    cl22861
    Location:1255 → 1453
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
Heading Accession and Version

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