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HES5 hes family bHLH transcription factor 5 [ Nestor notabilis (Kea) ]

Gene ID: 104401929, updated on 3-Aug-2024

Summary

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Gene symbol
HES5
Gene description
hes family bHLH transcription factor 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Nestor notabilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Nestor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM69687v1 (GCF_000696875.1) Unplaced Scaffold NW_009918333.1 (348..1136)

NW_009918333.1Genomic Context describing neighboring genes Neighboring gene membrane metalloendopeptidase like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009918333.1 Unplaced Scaffold Reference ASM69687v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor HES-5
Names
Transcription factor HES-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nestor notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69687v1

Genomic

  1. NW_009918333.1 Reference ASM69687v1

    Range
    348..1136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010009665.1 → XP_010007967.1  transcription factor HES-5

    See identical proteins and their annotated locations for XP_010007967.1

    UniProtKB/TrEMBL
    A0A091RV53
    Conserved Domains (2) summary
    smart00511
    Location:93 → 128
    ORANGE; Orange domain
    cd00083
    Location:17 → 79
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
Nucleotide Protein
Heading Accession and Version

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