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ADAMTSL1 ADAMTS like 1 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104398374, updated on 3-Aug-2024

Summary

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Gene symbol
ADAMTSL1
Gene description
ADAMTS like 1
Locus tag
M959_05494
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009952441.1 (1424988..1549964)

NW_009952441.1Genomic Context describing neighboring genes Neighboring gene WW domain containing E3 ubiquitin protein ligase 2 Neighboring gene proteasome 26S subunit, non-ATPase 7 Neighboring gene stabilizer of axonemal microtubules 1 Neighboring gene HAUS augmin like complex subunit 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009952441.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009952441.1 Reference ChaPel_1.0

    Range
    1424988..1549964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010008480.1 → XP_010006782.1  ADAMTS-like protein 1

    Conserved Domains (6) summary
    smart00408
    Location:1166 → 1228
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:1304 → 1359
    TSP1; Thrombospondin type 1 repeats
    smart00410
    Location:1041 → 1126
    IG_like; Immunoglobulin like
    pfam07679
    Location:936 → 1022
    I-set; Immunoglobulin I-set domain
    pfam08686
    Location:1464 → 1493
    PLAC; PLAC (protease and lacunin) domain
    cl11960
    Location:953 → 1018
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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