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TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104394830, updated on 3-Aug-2024

Summary

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Gene symbol
TCIRG1
Gene description
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3
Locus tag
M959_11893
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009954422.1 (281948..285709, complement)

NW_009954422.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 1009-like Neighboring gene T-box transcription factor TBX1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009954422.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase 116 kDa subunit a isoform 3
Names
V-type proton ATPase 116 kDa subunit a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009954422.1 Reference ChaPel_1.0

    Range
    281948..285709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010004466.1 → XP_010002768.1  V-type proton ATPase 116 kDa subunit a isoform 3

    UniProtKB/TrEMBL
    A0A093BSW9
    Conserved Domains (1) summary
    pfam01496
    Location:1 → 526
    V_ATPase_I; V-type ATPase 116kDa subunit family
Nucleotide Protein
Heading Accession and Version

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