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PRDM12 PR/SET domain 12 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104389930, updated on 12-Mar-2024

Summary

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Gene symbol
PRDM12
Gene description
PR/SET domain 12
Locus tag
M959_09407
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953489.1 (5545484..5589531, complement)

NW_009953489.1Genomic Context describing neighboring genes Neighboring gene ABL proto-oncogene 1, non-receptor tyrosine kinase Neighboring gene exosome component 2 Neighboring gene far upstream element binding protein 3 Neighboring gene argininosuccinate synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953489.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone methyltransferase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PR domain zinc finger protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953489.1 Reference ChaPel_1.0

    Range
    5545484..5589531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009998988.1 → XP_009997290.1  PR domain zinc finger protein 12

    Conserved Domains (5) summary
    COG5048
    Location:180 → 278
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:181 → 201
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:180 → 201
    zf-C2H2; Zinc finger, C2H2 type
    pfam00856
    Location:35 → 139
    SET; SET domain
    pfam13465
    Location:193 → 218
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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