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VPS33A VPS33A core subunit of CORVET and HOPS complexes [ Tyto alba (common barn owl) ]

Gene ID: 104364567, updated on 3-Aug-2024

Summary

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Gene symbol
VPS33A
Gene description
VPS33A core subunit of CORVET and HOPS complexes
Locus tag
N341_09169
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881320.1 (3159399..3168982)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_010012692.1 (9..7683)

NW_024881320.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCHC-type containing 8 Neighboring gene CAP-Gly domain containing linker protein 1 Neighboring gene uncharacterized LOC116965375 Neighboring gene diablo IAP-binding mitochondrial protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CORVET complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 33A
Names
VPS33A, CORVET/HOPS core subunit
Vacuolar protein sorting-associated protein 33A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881320.1 Reference T.alba_DEE_v4.0

    Range
    3159399..3168982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033008340.2 → XP_032864231.2  vacuolar protein sorting-associated protein 33A isoform X1

    UniProtKB/TrEMBL
    A0A093FJG6
    Conserved Domains (1) summary
    cl15415
    Location:12 → 593
    Sec1; Sec1 family

  2. XM_033008341.2 → XP_032864232.2  vacuolar protein sorting-associated protein 33A isoform X2

    UniProtKB/TrEMBL
    A0A093FJG6
    Conserved Domains (1) summary
    cl15415
    Location:12 → 460
    Sec1; Sec1 family

RNA

  1. XR_006166735.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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