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TAPT1 transmembrane anterior posterior transformation 1 [ Tyto alba (common barn owl) ]

Gene ID: 104357542, updated on 3-Aug-2024

Summary

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Gene symbol
TAPT1
Gene description
transmembrane anterior posterior transformation 1
Locus tag
N341_09352
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881327.1 (39040532..39085123)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009985487.1 (10097..31960)

NW_024881327.1Genomic Context describing neighboring genes Neighboring gene quinoid dihydropteridine reductase Neighboring gene LIM domain binding 2 Neighboring gene prominin 1 Neighboring gene fibroblast growth factor binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maintenance of protein localization in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane anterior posterior transformation protein 1 homolog
Names
Transmembrane anterior posterior transformation protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881327.1 Reference T.alba_DEE_v4.0

    Range
    39040532..39085123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042807642.1 → XP_042663576.1  transmembrane anterior posterior transformation protein 1 homolog isoform X2

  2. XM_042807641.1 → XP_042663575.1  transmembrane anterior posterior transformation protein 1 homolog isoform X1

  3. XM_042807645.1 → XP_042663579.1  transmembrane anterior posterior transformation protein 1 homolog isoform X5

    UniProtKB/TrEMBL
    A0A093EQB0

  4. XM_042807643.1 → XP_042663577.1  transmembrane anterior posterior transformation protein 1 homolog isoform X3

    UniProtKB/TrEMBL
    A0A093EQB0

  5. XM_042807644.1 → XP_042663578.1  transmembrane anterior posterior transformation protein 1 homolog isoform X4

    UniProtKB/TrEMBL
    A0A093EQB0

  6. XM_042807647.1 → XP_042663581.1  transmembrane anterior posterior transformation protein 1 homolog isoform X6

    UniProtKB/TrEMBL
    A0A093EQB0
Nucleotide Protein
Heading Accession and Version

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