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Marky_0858 Formamidopyrimidine-DNA glycosylase [ Marinithermus hydrothermalis DSM 14884 ]

Gene ID: 10433756, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
Marky_0858
Gene description
Formamidopyrimidine-DNA glycosylase
Locus tag
Marky_0858
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Marinithermus hydrothermalis DSM 14884 (strain: DSM 14884, culture-collection: DSMZ:DSM 14884)
Lineage
Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_015387.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
Formamidopyrimidine-DNA glycosylase
YP_004367714.1
  • COGs: COG0266 Formamidopyrimidine-DNA glycosylase
    HAMAP: Formamidopyrimidine-DNA glycosylase
    InterProIPR000191:IPR012319:IPR020629:IPR015886:IPR 010663
    KEGG: msv:Mesil_1478 formamidopyrimidine-DNA glycosylase
    PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase, catalytic domain; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
    PRIAM: DNA-formamidopyrimidine glycosylase
    SMART: DNA glycosylase/AP lyase, catalytic domain
    SPTR: Formamidopyrimidine-DNA glycosylase;
    TIGRFAM: DNA glycosylase/AP lyase
    PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS
    TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015387.1 Reference assembly

    Range
    826603..827397
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004367714.1 Formamidopyrimidine-DNA glycosylase [Marinithermus hydrothermalis DSM 14884]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version