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ADAMTSL1 ADAMTS like 1 [ Opisthocomus hoazin ]

Gene ID: 104329366, updated on 3-Aug-2024

Summary

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Gene symbol
ADAMTSL1
Gene description
ADAMTS like 1
Locus tag
N306_09702
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009901147.1 (65855..246277, complement)

NW_009901147.1Genomic Context describing neighboring genes Neighboring gene HAUS augmin like complex subunit 6 Neighboring gene stabilizer of axonemal microtubules 1 Neighboring gene SH3 domain containing GRB2 like 2, endophilin A1 Neighboring gene centlein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009901147.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009901147.1 Reference ASM69207v1

    Range
    65855..246277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009934479.1 → XP_009932781.1  ADAMTS-like protein 1

    Conserved Domains (7) summary
    smart00408
    Location:1425 → 1487
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:46 → 92
    TSP1; Thrombospondin type 1 repeats
    smart00410
    Location:1421 → 1495
    IG_like; Immunoglobulin like
    pfam07679
    Location:1295 → 1385
    I-set; Immunoglobulin I-set domain
    pfam08686
    Location:1741 → 1770
    PLAC; PLAC (protease and lacunin) domain
    cl11960
    Location:1212 → 1277
    Ig; Immunoglobulin domain
    cl15278
    Location:745 → 798
    TSP_1; Thrombospondin type 1 domain
Nucleotide Protein
Heading Accession and Version

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