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KDM4A lysine demethylase 4A [ Haliaeetus albicilla (white-tailed eagle) ]

Gene ID: 104323067, updated on 3-Aug-2024

Summary

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Gene symbol
KDM4A
Gene description
lysine demethylase 4A
Locus tag
N329_06255
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus albicilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM69140v1 (GCF_000691405.1) Unplaced Scaffold NW_009751478.1 (570..25810)

NW_009751478.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009751478.1 Unplaced Scaffold Reference ASM69140v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K36 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K9 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine-specific demethylase 4A
Names
Lysine-specific demethylase 4A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus albicilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69140v1

Genomic

  1. NW_009751478.1 Reference ASM69140v1

    Range
    570..25810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009926526.1 → XP_009924828.1  lysine-specific demethylase 4A

    UniProtKB/TrEMBL
    A0A091NVP1
    Conserved Domains (4) summary
    smart00333
    Location:866 → 921
    TUDOR; Tudor domain
    pfam02373
    Location:91 → 207
    JmjC; JmjC domain, hydroxylase
    cd15713
    Location:685 → 794
    ePHD_JMJD2A; Extended PHD finger (ePHD) found in Jumonji domain-containing protein 2A (JMJD2A)
    cl22851
    Location:578 → 676
    PHD_SF; PHD finger superfamily
Nucleotide Protein
Heading Accession and Version

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