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KDM5A lysine demethylase 5A [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104310214, updated on 3-Aug-2024

Summary

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Gene symbol
KDM5A
Gene description
lysine demethylase 5A
Locus tag
N307_00521
See related
EnsemblRapid:ENSPPUG00010003925
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 15 NC_071626.1 (26965027..27032192)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009662399.1 (726318..789805, complement)

Chromosome 15 - NC_071626.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 3 Neighboring gene coiled-coil domain containing 77 Neighboring gene sodium- and chloride-dependent GABA transporter 2 Neighboring gene solute carrier family 6 member 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine-specific demethylase 5A
Names
Lysine-specific demethylase 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071626.1 Reference bDryPub1.pri

    Range
    26965027..27032192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054167933.1 → XP_054023908.1  lysine-specific demethylase 5A

    UniProtKB/TrEMBL
    A0A093GAG8
    Related
    ENSPPUP00010004226.1, ENSPPUT00010006129.1
Nucleotide Protein
Heading Accession and Version

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