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LOC104309813 PNKD metallo-beta-lactamase domain containing [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104309813, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104309813
Gene description
PNKD metallo-beta-lactamase domain containing
Locus tag
N307_04392
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Also known as
PNKD
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 2 NC_071613.1 (38904814..38908933, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009662227.1 (1648327..1660306, complement)

Chromosome 2 - NC_071613.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 11 member 1 Neighboring gene ciliogenesis associated TTC17 interacting protein Neighboring gene transmembrane BAX inhibitor motif containing 1 Neighboring gene angio associated migratory cell protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxyacylglutathione hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable hydrolase PNKD
Names
PNKD, MBL domain containing
paroxysmal nonkinesigenic dyskinesia
putative hydrolase PNKD

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071613.1 Reference bDryPub1.pri

    Range
    38904814..38908933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054175738.1 → XP_054031713.1  probable hydrolase PNKD

Nucleotide Protein
Heading Accession and Version

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