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ARCN1 archain 1 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104307286, updated on 3-Aug-2024

Summary

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Gene symbol
ARCN1
Gene description
archain 1
Locus tag
N307_12557
See related
EnsemblRapid:ENSPPUG00010017385
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 34
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 34 NC_071645.1 (211048..219640, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009666193.1 (682497..688112)

Chromosome 34 - NC_071645.1Genomic Context describing neighboring genes Neighboring gene hypoxia up-regulated 1 Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene intraflagellar transport 46 Neighboring gene transmembrane protein 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coatomer subunit delta
Names
Coatomer subunit delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071645.1 Reference bDryPub1.pri

    Range
    211048..219640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054176210.1 → XP_054032185.1  coatomer subunit delta isoform X2

    UniProtKB/TrEMBL
    A0A093GWZ5
    Related
    ENSPPUP00010016424.1, ENSPPUT00010027281.1

  2. XM_054176209.1 → XP_054032184.1  coatomer subunit delta isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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