U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TNRC6B trinucleotide repeat containing adaptor 6B [ Charadrius vociferus (killdeer) ]

Gene ID: 104295526, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
TNRC6B
Gene description
trinucleotide repeat containing adaptor 6B
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646963.1 (2266485..2308005, complement)

NW_009646963.1Genomic Context describing neighboring genes Neighboring gene small G protein signaling modulator 3 Neighboring gene adenylosuccinate lyase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009646963.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein
Names
trinucleotide repeat containing 6B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646963.1 Reference ASM70802v2

    Range
    2266485..2308005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009895285.1 → XP_009893587.1  LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein

    Conserved Domains (4) summary
    pfam10427
    Location:900 → 1017
    Ago_hook; Argonaute hook
    pfam12938
    Location:1121 → 1230
    M_domain; M domain of GW182
    pfam16608
    Location:1334 → 1586
    TNRC6-PABC_bdg; TNRC6-PABC binding domain
    cl17169
    Location:1630 → 1712
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.