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ARVCF ARVCF delta catenin family member [ Charadrius vociferus (killdeer) ]

Gene ID: 104289203, updated on 3-Aug-2024

Summary

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Gene symbol
ARVCF
Gene description
ARVCF delta catenin family member
Locus tag
N301_08285
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009649062.1 (3195033..3360648)

NW_009649062.1Genomic Context describing neighboring genes Neighboring gene DGCR8 microprocessor complex subunit Neighboring gene transport and golgi organization 2 homolog Neighboring gene catechol-O-methyltransferase Neighboring gene thioredoxin reductase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009649062.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
armadillo repeat protein deleted in velo-cardio-facial syndrome
Names
Armadillo repeat protein deleted in velo-cardio-facial syndrome
armadillo repeat gene deleted in velocardiofacial syndrome

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009649062.1 Reference ASM70802v2

    Range
    3195033..3360648
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009888118.1 → XP_009886420.1  armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X2

    UniProtKB/TrEMBL
    A0A0A0AQI8
    Conserved Domains (3) summary
    cd00020
    Location:384 → 502
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam13646
    Location:671 → 757
    HEAT_2; HEAT repeats
    sd00043
    Location:389 → 414
    ARM; armadillo repeat [structural motif]

  2. XM_009888117.1 → XP_009886419.1  armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1

    UniProtKB/TrEMBL
    A0A0A0AQI8
    Conserved Domains (3) summary
    cd00020
    Location:384 → 502
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam13646
    Location:677 → 763
    HEAT_2; HEAT repeats
    sd00043
    Location:389 → 414
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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