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SHISA9 shisa family member 9 [ Charadrius vociferus (killdeer) ]

Gene ID: 104287848, updated on 3-Aug-2024

Summary

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Gene symbol
SHISA9
Gene description
shisa family member 9
Locus tag
N301_11092
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See SHISA9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648710.1 (2454099..2638392)

NW_009648710.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 29 Neighboring gene calcineurin like phosphoesterase domain containing 1 Neighboring gene ERCC excision repair 4, endonuclease catalytic subunit Neighboring gene myocardin related transcription factor B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648710.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of AMPA receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of short-term neuronal synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein shisa-9
Names
Protein shisa-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648710.1 Reference ASM70802v2

    Range
    2454099..2638392
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009886584.1 → XP_009884886.1  protein shisa-9

    Conserved Domains (1) summary
    pfam13908
    Location:1 → 174
    Shisa; Wnt and FGF inhibitory regulator
Nucleotide Protein
Heading Accession and Version

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