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PLN phospholamban [ Charadrius vociferus (killdeer) ]

Gene ID: 104284830, updated on 3-Aug-2024

Summary

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Gene symbol
PLN
Gene description
phospholamban
Locus tag
N301_05540
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646500.1 (2777018..2777358, complement)

NW_009646500.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 184 member A Neighboring gene minichromosome maintenance 9 homologous recombination repair factor Neighboring gene anti-silencing function 1A histone chaperone Neighboring gene centrosomal protein 85 like Neighboring gene solute carrier family 35 member F1 Neighboring gene NUS1 dehydrodolichyl diphosphate synthase subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646500.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of ATPase-coupled calcium transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of calcium ion import into sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of heart rate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cardiac phospholamban
Names
Cardiac phospholamban

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646500.1 Reference ASM70802v2

    Range
    2777018..2777358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009883206.1 → XP_009881508.1  cardiac phospholamban

    See identical proteins and their annotated locations for XP_009881508.1

    UniProtKB/TrEMBL
    A0A099ZXB7
    Conserved Domains (1) summary
    cd20250
    Location:1 → 52
    Phospholamban; Phospholamban bioactive peptide and similar proteins
Nucleotide Protein
Heading Accession and Version

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