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ZBTB42 zinc finger and BTB domain containing 42 [ Charadrius vociferus (killdeer) ]

Gene ID: 104283205, updated on 3-Aug-2024

Summary

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Gene symbol
ZBTB42
Gene description
zinc finger and BTB domain containing 42
Locus tag
N301_15141
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647685.1 (1204279..1205719)

NW_009647685.1Genomic Context describing neighboring genes Neighboring gene SIVA1 apoptosis inducing factor Neighboring gene AKT serine/threonine kinase 1 Neighboring gene centrosomal protein 170B Neighboring gene phospholipase D family member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647685.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 42
Names
Zinc finger and BTB domain-containing protein 18.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647685.1 Reference ASM70802v2

    Range
    1204279..1205719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009881361.1 → XP_009879663.1  zinc finger and BTB domain-containing protein 42

    See identical proteins and their annotated locations for XP_009879663.1

    UniProtKB/TrEMBL
    A0A0A0A8Q5
    Conserved Domains (4) summary
    smart00225
    Location:25 → 121
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:390 → 410
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 118
    BTB; BTB/POZ domain
    pfam13465
    Location:403 → 425
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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