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DNAAF1 dynein axonemal assembly factor 1 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104279699, updated on 3-Aug-2024

Summary

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Gene symbol
DNAAF1
Gene description
dynein axonemal assembly factor 1
Locus tag
N311_02298
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009736724.1 (29958..41001, complement)

NW_009736724.1Genomic Context describing neighboring genes Neighboring gene heat shock factor protein 4-like Neighboring gene F-box and leucine rich repeat protein 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009736724.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: dynein assembly factor 1, axonemal
Names
Dynein assembly factor 1, axonemal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009736724.1 Reference ASM70340v1

    Range
    29958..41001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009877074.1 → XP_009875376.1  LOW QUALITY PROTEIN: dynein assembly factor 1, axonemal

    Conserved Domains (4) summary
    cd00116
    Location:92 → 254
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:130 → 151
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:150 → 191
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:173 → 231
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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