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ARVCF ARVCF delta catenin family member [ Gavia stellata (red-throated loon) ]

Gene ID: 104253466, updated on 3-Aug-2024

Summary

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Gene symbol
ARVCF
Gene description
ARVCF delta catenin family member
See related
EnsemblRapid:ENSGSTG00005015122
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 21 NC_082614.1 (7595619..7780883, complement)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009277836.1 (60..83376, complement)

Chromosome 21 - NC_082614.1Genomic Context describing neighboring genes Neighboring gene thioredoxin reductase 2 Neighboring gene catechol-O-methyltransferase Neighboring gene transport and golgi organization 2 homolog Neighboring gene DGCR8 microprocessor complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
splicing regulator ARVCF
Names
armadillo repeat gene deleted in velocardiofacial syndrome

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082614.1 Reference bGavSte3.hap2

    Range
    7595619..7780883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059827845.1 → XP_059683828.1  splicing regulator ARVCF isoform X5

  2. XM_059827844.1 → XP_059683827.1  splicing regulator ARVCF isoform X4

    Related
    ENSGSTP00005023397.1, ENSGSTT00005024381.1

  3. XM_059827841.1 → XP_059683824.1  splicing regulator ARVCF isoform X1

    Related
    ENSGSTP00005023411.1, ENSGSTT00005024395.1

  4. XM_059827842.1 → XP_059683825.1  splicing regulator ARVCF isoform X2

  5. XM_059827843.1 → XP_059683826.1  splicing regulator ARVCF isoform X3

    Related
    ENSGSTP00005023403.1, ENSGSTT00005024387.1

  6. XM_059827847.1 → XP_059683830.1  splicing regulator ARVCF isoform X6

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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