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SMYD3 SET and MYND domain containing 3 [ Struthio camelus (African ostrich) ]

Gene ID: 104151720, updated on 23-Aug-2024

Summary

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Gene symbol
SMYD3
Gene description
SET and MYND domain containing 3
Locus tag
N308_06098
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM69896v1 (GCF_000698965.1) Unplaced Scaffold NW_009272089.1 (609143..991844, complement)

NW_009272089.1Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 2 Neighboring gene kinesin family member 26B Neighboring gene transcription factor B2, mitochondrial Neighboring gene consortin, connexin sorting protein Neighboring gene saccharopine dehydrogenase (putative)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009272089.1 Unplaced Scaffold Reference ASM69896v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase SMYD3
Names
Histone-lysine N-methyltransferase SMYD3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Struthio camelus australis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69896v1 Primary Assembly

Genomic

  1. NW_009272089.1 Reference ASM69896v1 Primary Assembly

    Range
    609143..991844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009686720.1 → XP_009685015.1  histone-lysine N-methyltransferase SMYD3

    Conserved Domains (3) summary
    pfam00856
    Location:177 → 215
    SET; SET domain
    pfam01753
    Location:48 → 79
    zf-MYND; MYND finger
    pfam13424
    Location:312 → 377
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
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