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DENND3 DENN domain containing 3 [ Egretta garzetta (little egret) ]

Gene ID: 104135603, updated on 3-Aug-2024

Summary

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Gene symbol
DENND3
Gene description
DENN domain containing 3
Locus tag
Z169_10646
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258757.1 (447777..486290)

NW_009258757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118451708 Neighboring gene protein tyrosine kinase 2 Neighboring gene solute carrier family 45 member 4 Neighboring gene uncharacterized LOC118451706 Neighboring gene G protein-coupled receptor 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258757 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DENN domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258757.1 Reference ASM68718v1 Primary Assembly

    Range
    447777..486290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009649270.2 → XP_009647565.1  DENN domain-containing protein 3

    Conserved Domains (6) summary
    smart00801
    Location:407 → 469
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    COG2319
    Location:1006 → 1242
    WD40; WD40 repeat [General function prediction only]
    pfam02141
    Location:157 → 343
    DENN; DENN (AEX-3) domain
    sd00039
    Location:996 → 1031
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:992 → 1241
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl04085
    Location:73 → 124
    uDENN; uDENN domain
Nucleotide Protein
Heading Accession and Version

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