U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TNRC6B trinucleotide repeat containing adaptor 6B [ Egretta garzetta (little egret) ]

Gene ID: 104134244, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
TNRC6B
Gene description
trinucleotide repeat containing adaptor 6B
Locus tag
Z169_12065
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258549.1 (3744058..3820129)

NW_009258549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118453263 Neighboring gene uncharacterized LOC118453264 Neighboring gene adenylosuccinate lyase Neighboring gene small G protein signaling modulator 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009258549 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
trinucleotide repeat-containing gene 6B protein
Names
Trinucleotide repeat-containing gene 6B protein
trinucleotide repeat containing 6B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258549.1 Reference ASM68718v1 Primary Assembly

    Range
    3744058..3820129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035903191.1 → XP_035759084.1  trinucleotide repeat-containing gene 6B protein

    UniProtKB/TrEMBL
    A0A091IRR0
    Conserved Domains (4) summary
    pfam10427
    Location:915 → 1058
    Ago_hook; Argonaute hook
    pfam16608
    Location:1301 → 1565
    TNRC6-PABC_bdg; TNRC6-PABC binding domain
    cd12712
    Location:1567 → 1649
    RRM_TNRC6B; RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein (TNRC6B)
    NF033849
    Location:331 → 591
    ser_rich_anae_1; serine-rich protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.