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CEP350 centrosomal protein 350 [ Egretta garzetta (little egret) ]

Gene ID: 104132045, updated on 3-Aug-2024

Summary

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Gene symbol
CEP350
Gene description
centrosomal protein 350
Locus tag
Z169_13424
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See CEP350 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
41
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260621.1 (197448..282511)

NW_009260621.1Genomic Context describing neighboring genes Neighboring gene ADAMTS-like protein 2 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene torsin-1A-interacting protein 1 Neighboring gene quiescin sulfhydryl oxidase 1 Neighboring gene LIM homeobox 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260621 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule anchoring IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosome-associated protein 350
Names
Centrosome-associated protein 350

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260621.1 Reference ASM68718v1 Primary Assembly

    Range
    197448..282511
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035900789.1 → XP_035756682.1  centrosome-associated protein 350 isoform X1

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG0419
    Location:1686 → 1996
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG5244
    Location:2552 → 2869
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:546 → 690
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2552 → 2616
    CAP_GLY; CAP-Gly domain

  2. XM_035900788.1 → XP_035756681.1  centrosome-associated protein 350 isoform X1

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG0419
    Location:1686 → 1996
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG5244
    Location:2552 → 2869
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:546 → 690
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2552 → 2616
    CAP_GLY; CAP-Gly domain

  3. XM_035900793.1 → XP_035756686.1  centrosome-associated protein 350 isoform X5

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG4913
    Location:1317 → 1899
    COG4913; Uncharacterized protein, contains a C-terminal ATPase domain [Function unknown]
    COG5244
    Location:2514 → 2831
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:546 → 690
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2514 → 2578
    CAP_GLY; CAP-Gly domain

  4. XM_035900792.1 → XP_035756685.1  centrosome-associated protein 350 isoform X4

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (5) summary
    COG4913
    Location:1330 → 1562
    COG4913; Uncharacterized protein, contains a C-terminal ATPase domain [Function unknown]
    COG5244
    Location:2536 → 2853
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:546 → 690
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam17380
    Location:1661 → 1959
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:2536 → 2600
    CAP_GLY; CAP-Gly domain

  5. XM_035900794.1 → XP_035756687.1  centrosome-associated protein 350 isoform X6

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG4913
    Location:1330 → 1883
    COG4913; Uncharacterized protein, contains a C-terminal ATPase domain [Function unknown]
    COG5244
    Location:2498 → 2815
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:546 → 690
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2498 → 2562
    CAP_GLY; CAP-Gly domain

  6. XM_035900790.1 → XP_035756683.1  centrosome-associated protein 350 isoform X2

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG0419
    Location:1685 → 1995
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG5244
    Location:2551 → 2868
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:545 → 689
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2551 → 2615
    CAP_GLY; CAP-Gly domain

  7. XM_035900795.1 → XP_035756688.1  centrosome-associated protein 350 isoform X7

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG4913
    Location:1329 → 1882
    COG4913; Uncharacterized protein, contains a C-terminal ATPase domain [Function unknown]
    COG5244
    Location:2497 → 2814
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:545 → 689
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2497 → 2561
    CAP_GLY; CAP-Gly domain

  8. XM_035900791.1 → XP_035756684.1  centrosome-associated protein 350 isoform X3

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG0419
    Location:1676 → 1986
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG5244
    Location:2542 → 2859
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:536 → 680
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2542 → 2606
    CAP_GLY; CAP-Gly domain

  9. XM_035900796.1 → XP_035756689.1  centrosome-associated protein 350 isoform X8

    UniProtKB/TrEMBL
    A0A091KBZ9
    Conserved Domains (4) summary
    COG0419
    Location:1625 → 1935
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG5244
    Location:2491 → 2808
    NIP100; Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning]
    PTZ00053
    Location:485 → 629
    PTZ00053; methionine aminopeptidase 2; Provisional
    pfam01302
    Location:2491 → 2555
    CAP_GLY; CAP-Gly domain
Nucleotide Protein
Heading Accession and Version

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