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PRDM12 PR/SET domain 12 [ Egretta garzetta (little egret) ]

Gene ID: 104129833, updated on 3-Aug-2024

Summary

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Gene symbol
PRDM12
Gene description
PR/SET domain 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260349.1 (459416..483171)

NW_009260349.1Genomic Context describing neighboring genes Neighboring gene hemicentin 2 Neighboring gene argininosuccinate synthase 1 Neighboring gene far upstream element binding protein 3 Neighboring gene exosome component 2 Neighboring gene ABL proto-oncogene 1, non-receptor tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260349 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone methyltransferase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PR domain zinc finger protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260349.1 Reference ASM68718v1 Primary Assembly

    Range
    459416..483171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035898236.1 → XP_035754129.1  PR domain zinc finger protein 12

    Conserved Domains (4) summary
    sd00017
    Location:111 → 131
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl40432
    Location:5 → 79
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
    pfam00096
    Location:110 → 131
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:123 → 142
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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