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CACNA1D calcium voltage-gated channel subunit alpha1 D [ Egretta garzetta (little egret) ]

Gene ID: 104126731, updated on 3-Aug-2024

Summary

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Gene symbol
CACNA1D
Gene description
calcium voltage-gated channel subunit alpha1 D
Locus tag
Z169_04549
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
50
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259719.1 (4794841..4993188, complement)

NW_009259719.1Genomic Context describing neighboring genes Neighboring gene interleukin 17 receptor B Neighboring gene choline dehydrogenase Neighboring gene decapping mRNA 1A Neighboring gene transketolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259719 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent L-type calcium channel subunit alpha-1D
Names
Voltage-dependent L-type calcium channel subunit alpha-1D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259719.1 Reference ASM68718v1 Primary Assembly

    Range
    4794841..4993188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035894713.1 → XP_035750606.1  voltage-dependent L-type calcium channel subunit alpha-1D

    UniProtKB/TrEMBL
    A0A091J941
    Conserved Domains (4) summary
    pfam00520
    Location:118 → 410
    Ion_trans; Ion transport protein
    pfam08763
    Location:1622 → 1693
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1716 → 2232
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1558 → 1611
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
Nucleotide Protein
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