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TRAFD1 TRAF-type zinc finger domain containing 1 [ Egretta garzetta (little egret) ]

Gene ID: 104123946, updated on 3-Aug-2024

Summary

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Gene symbol
TRAFD1
Gene description
TRAF-type zinc finger domain containing 1
Locus tag
Z169_08059
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258275.1 (719635..730701, complement)

NW_009258275.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L6 Neighboring gene HECT domain E3 ubiquitin protein ligase 4 Neighboring gene N-alpha-acetyltransferase 25, NatB auxiliary subunit Neighboring gene endoplasmic reticulum protein 29 Neighboring gene transmembrane protein 116

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258275 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF-type zinc finger domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258275.1 Reference ASM68718v1 Primary Assembly

    Range
    719635..730701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035891543.1 → XP_035747436.1  TRAF-type zinc finger domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A091IKI0
    Conserved Domains (1) summary
    PLN03086
    Location:8 → 132
    PLN03086; PRLI-interacting factor K; Provisional

  2. XM_035891537.1 → XP_035747430.1  TRAF-type zinc finger domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A091IKI0
    Conserved Domains (2) summary
    PHA03381
    Location:365 → 537
    PHA03381; tegument protein VP22; Provisional
    PLN03086
    Location:8 → 132
    PLN03086; PRLI-interacting factor K; Provisional
Nucleotide Protein
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