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SAMD8 sterile alpha motif domain containing 8 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104067933, updated on 3-Aug-2024

Summary

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Gene symbol
SAMD8
Gene description
sterile alpha motif domain containing 8
Locus tag
N303_09276
See related
EnsemblRapid:ENSCCOG00010000737
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 7 NC_071407.1 (22426069..22443773)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009243858.1 (6985701..6991399)

Chromosome 7 - NC_071407.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128852653 Neighboring gene dual specificity protein phosphatase 13-like Neighboring gene dual specificity protein phosphatase 13-like Neighboring gene voltage dependent anion channel 2 Neighboring gene catechol-O-methyltransferase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingomyelin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin synthase-related protein 1
Names
Sphingomyelin synthase-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071407.1 Reference bCucCan1.pri

    Range
    22426069..22443773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054070858.1 → XP_053926833.1  sphingomyelin synthase-related protein 1

    UniProtKB/TrEMBL
    A0A091FQ32

  2. XM_054070860.1 → XP_053926835.1  sphingomyelin synthase-related protein 1

    UniProtKB/TrEMBL
    A0A091FQ32

  3. XM_054070859.1 → XP_053926834.1  sphingomyelin synthase-related protein 1

    UniProtKB/TrEMBL
    A0A091FQ32
    Related
    ENSCCOP00010001056.1, ENSCCOT00010001243.1
Nucleotide Protein
Heading Accession and Version

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