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IFT172 intraflagellar transport 172 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104066470, updated on 3-Aug-2024

Summary

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Gene symbol
IFT172
Gene description
intraflagellar transport 172
Locus tag
N303_10505
See related
EnsemblRapid:ENSCCOG00010020486
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See IFT172 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
48
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 3 NC_071403.1 (66398021..66441943)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009248846.1 (599701..641911)

Chromosome 3 - NC_071403.1Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 4 Neighboring gene low density lipoprotein receptor adapter protein 1 Neighboring gene keratinocyte associated protein 3 Neighboring gene nuclear receptor binding protein 1 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1G

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 172 homolog
Names
Intraflagellar transport protein 172

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071403.1 Reference bCucCan1.pri

    Range
    66398021..66441943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054061530.1 → XP_053917505.1  intraflagellar transport protein 172 homolog isoform X1

    UniProtKB/TrEMBL
    A0A091GJN3

  2. XM_054061531.1 → XP_053917506.1  intraflagellar transport protein 172 homolog isoform X2

    UniProtKB/TrEMBL
    A0A091GJN3
    Related
    ENSCCOP00010028919.1, ENSCCOT00010036139.1

  3. XM_054061532.1 → XP_053917507.1  intraflagellar transport protein 172 homolog isoform X3

    UniProtKB/TrEMBL
    A0A091GJN3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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