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LOC104054348 FANCD2 and FANCI associated nuclease 1 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104054348, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104054348
Gene description
FANCD2 and FANCI associated nuclease 1
Locus tag
N303_08424
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Also known as
FAN1
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Genomic context

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See LOC104054348 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 12 NC_071412.1 (20926862..20938654, complement)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009243906.1 (456754..471169, complement)

Chromosome 12 - NC_071412.1Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 10 Neighboring gene fanconi-associated nuclease 1-like Neighboring gene M-phase phosphoprotein 10 Neighboring gene uncharacterized LOC128853343 Neighboring gene methylmalonyl-CoA epimerase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 5'-flap endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flap-structured DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fanconi-associated nuclease 1
Names
FANCD2/FANCI-associated nuclease 1
Fanconi-associated nuclease 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071412.1 Reference bCucCan1.pri

    Range
    20926862..20938654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054077232.1 → XP_053933207.1  fanconi-associated nuclease 1

    UniProtKB/TrEMBL
    A0A091FR16

  2. XM_054077230.1 → XP_053933205.1  fanconi-associated nuclease 1

    UniProtKB/TrEMBL
    A0A091FR16

  3. XM_054077229.1 → XP_053933204.1  fanconi-associated nuclease 1

    UniProtKB/TrEMBL
    A0A091FR16
Nucleotide Protein
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