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TAT tyrosine aminotransferase [ Nipponia nippon (crested ibis) ]

Gene ID: 104023550, updated on 18-Sep-2024

Summary

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Gene symbol
TAT
Gene description
tyrosine aminotransferase
Locus tag
Y956_10934
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008999127.1 (102019..111621, complement)

NW_008999127.1Genomic Context describing neighboring genes Neighboring gene TERF2 interacting protein Neighboring gene carbohydrate sulfotransferase 4 Neighboring gene MARVEL domain containing 3 Neighboring gene PH domain and leucine rich repeat protein phosphatase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008999127.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-tyrosine-2-oxoglutarate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aromatic amino acid family catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008999127.1 Reference ASM70822v1 Primary Assembly

    Range
    102019..111621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009477381.1 → XP_009475656.1  tyrosine aminotransferase

    See identical proteins and their annotated locations for XP_009475656.1

    UniProtKB/TrEMBL
    A0A091URI9
    Conserved Domains (3) summary
    cd00609
    Location:74 → 436
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    TIGR01264
    Location:41 → 442
    tyr_amTase_E; tyrosine aminotransferase, eukaryotic
    pfam07706
    Location:1 → 40
    TAT_ubiq; Aminotransferase ubiquitination site
Nucleotide Protein
Heading Accession and Version

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