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CLXN calaxin [ Nipponia nippon (crested ibis) ]

Gene ID: 104014048, updated on 3-Aug-2024

Summary

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Gene symbol
CLXN
Gene description
calaxin
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Also known as
EFCAB1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009000962.1 (1309063..1319794)

NW_009000962.1Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase 6 Neighboring gene family with sequence similarity 133 member B Neighboring gene RNA binding motif protein 48 Neighboring gene peroxisomal biogenesis factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009000962.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand calcium-binding domain-containing protein 1
Names
EF-hand calcium binding domain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009000962.1 Reference ASM70822v1 Primary Assembly

    Range
    1309063..1319794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009466634.1 → XP_009464909.1  EF-hand calcium-binding domain-containing protein 1

    Conserved Domains (2) summary
    cd00051
    Location:140 → 209
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:140 → 208
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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