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COL28A1 collagen type XXVIII alpha 1 chain [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103918737, updated on 3-Aug-2024

Summary

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Gene symbol
COL28A1
Gene description
collagen type XXVIII alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824988.1 (6305633..6352403)

NW_008824988.1Genomic Context describing neighboring genes Neighboring gene replication protein A3 Neighboring gene meiosis regulator for oocyte development

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008824988.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(XXVIII) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008824988.1 Reference ASM69910v1 Primary Assembly

    Range
    6305633..6352403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009326130.1 → XP_009324405.1  collagen alpha-1(XXVIII) chain

    Conserved Domains (2) summary
    pfam01391
    Location:243 → 299
    Collagen; Collagen triple helix repeat (20 copies)
    cd01450
    Location:46 → 212
    vWFA_subfamily_ECM; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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