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GPHN gephyrin [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103902486, updated on 3-Aug-2024

Summary

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Gene symbol
GPHN
Gene description
gephyrin
Locus tag
AS27_11109
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795717.1 (72774..277057)

NW_008795717.1Genomic Context describing neighboring genes Neighboring gene protein associated with LIN7 1, MAGUK p55 family member Neighboring gene ATPase H+ transporting V1 subunit D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795717.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molybdopterin molybdotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Mo-molybdopterin cofactor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of synaptic specificity at neuromuscular junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gamma-aminobutyric acid receptor clustering IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycine receptor clustering IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in molybdenum incorporation into molybdenum-molybdopterin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic neurotransmitter receptor diffusion trapping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic specialization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gephyrin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795717.1 Reference ASM69914v1

    Range
    72774..277057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009283545.1 → XP_009281820.1  gephyrin

    UniProtKB/TrEMBL
    A0A087RA82
    Conserved Domains (3) summary
    COG0303
    Location:335 → 744
    MoeA; Molybdopterin biosynthesis enzyme [Coenzyme transport and metabolism]
    cd00886
    Location:1 → 147
    MogA_MoaB; MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, ...
    cd00887
    Location:341 → 747
    MoeA; MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and ...
Nucleotide Protein
Heading Accession and Version

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