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PCGF5 polycomb group ring finger 5 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103897658, updated on 3-Aug-2024

Summary

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Gene symbol
PCGF5
Gene description
polycomb group ring finger 5
Locus tag
AS27_02613
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795129.1 (7815640..7871479)

NW_008795129.1Genomic Context describing neighboring genes Neighboring gene ribonuclease P/MRP subunit p30 Neighboring gene ankyrin repeat domain 1 Neighboring gene HECT domain E3 ubiquitin protein ligase 2 Neighboring gene protein phosphatase 1 regulatory subunit 3C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795129.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb group RING finger protein 5
Names
Polycomb group RING finger protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795129.1 Reference ASM69914v1

    Range
    7815640..7871479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009277756.2 → XP_009276031.1  polycomb group RING finger protein 5 isoform X1

    See identical proteins and their annotated locations for XP_009276031.1

    UniProtKB/TrEMBL
    A0A087QZ28
    Conserved Domains (2) summary
    pfam00097
    Location:18 → 56
    zf-C3HC4; Zinc finger, C3HC4 type (RING finger)
    pfam16207
    Location:154 → 250
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like

  2. XM_009277757.2 → XP_009276032.1  polycomb group RING finger protein 5 isoform X2

    See identical proteins and their annotated locations for XP_009276032.1

    Conserved Domains (2) summary
    pfam00097
    Location:18 → 56
    zf-C3HC4; Zinc finger, C3HC4 type (RING finger)
    pfam16207
    Location:154 → 230
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like
Nucleotide Protein
Heading Accession and Version

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