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HDAC7 histone deacetylase 7 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103894923, updated on 3-Aug-2024

Summary

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Gene symbol
HDAC7
Gene description
histone deacetylase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794786.1 (538683..587633)

NW_008794786.1Genomic Context describing neighboring genes Neighboring gene acid sensing ion channel subunit 1 Neighboring gene Rac GTPase activating protein 1 Neighboring gene twist-related protein 2 Neighboring gene solute carrier family 48 member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794786.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794786.1 Reference ASM69914v1

    Range
    538683..587633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009274404.2 → XP_009272679.1  histone deacetylase 7 isoform X1

    Conserved Domains (2) summary
    cd10008
    Location:601 → 978
    HDAC7; Histone deacetylase 7
    cl23765
    Location:67 → 141
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

  2. XM_009274405.2 → XP_009272680.1  histone deacetylase 7 isoform X2

    Conserved Domains (2) summary
    cd10008
    Location:562 → 939
    HDAC7; Histone deacetylase 7
    cl23765
    Location:67 → 141
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
Nucleotide Protein
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