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ITGA1 integrin subunit alpha 1 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103893412, updated on 3-Aug-2024

Summary

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Gene symbol
ITGA1
Gene description
integrin subunit alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794581.1 (7165684..7240986, complement)

NW_008794581.1Genomic Context describing neighboring genes Neighboring gene molybdenum cofactor synthesis 2 Neighboring gene integrin subunit alpha 2 Neighboring gene pelota mRNA surveillance and ribosome rescue factor Neighboring gene ISL LIM homeobox 1 Neighboring gene uncharacterized LOC109279258

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794581.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794581.1 Reference ASM69914v1

    Range
    7165684..7240986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009272535.2 → XP_009270810.1  integrin alpha-1

    Conserved Domains (3) summary
    smart00191
    Location:556 → 609
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:161 → 341
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:652 → 1064
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
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