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TSPAN7 tetraspanin 7 [ Serinus canaria (Common canary) ]

Gene ID: 103815781, updated on 12-Aug-2024

Summary

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Gene symbol
TSPAN7
Gene description
tetraspanin 7
See related
EnsemblRapid:ENSSCAG00000011549
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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See TSPAN7 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 1 NC_066313.1 (106233255..106322758)

Chromosome 1 - NC_066313.1Genomic Context describing neighboring genes Neighboring gene retinitis pigmentosa GTPase regulator Neighboring gene ornithine transcarbamylase Neighboring gene uncharacterized LOC127060000 Neighboring gene MID1 interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066313.1 Chromosome 1 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066313.1 Reference serCan2020 Primary Assembly

    Range
    106233255..106322758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030234499.2 → XP_030090359.1  tetraspanin-7

    UniProtKB/TrEMBL
    A0A8C9NCK9
    Related
    ENSSCAP00000015781.2, ENSSCAT00000017672.2
    Conserved Domains (2) summary
    cd03161
    Location:110 → 213
    TM4SF2_6_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:15 → 237
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

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