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CHDH choline dehydrogenase [ Acanthisitta chloris (rifleman) ]

Gene ID: 103802710, updated on 3-Aug-2024

Summary

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Gene symbol
CHDH
Gene description
choline dehydrogenase
Locus tag
N310_12240
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Acanthisittidae; Acanthisitta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008674189.1 (146406..155491, complement)

NW_008674189.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel subunit alpha1 D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008674189.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine betaine biosynthetic process from choline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008674189.1 Reference ASM69581v1

    Range
    146406..155491 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009075229.1 → XP_009073477.1  choline dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A091MUR4
    Conserved Domains (4) summary
    PRK02106
    Location:54 → 611
    PRK02106; choline dehydrogenase; Validated
    pfam00732
    Location:133 → 356
    GMC_oxred_N; GMC oxidoreductase
    pfam05199
    Location:447 → 584
    GMC_oxred_C; GMC oxidoreductase
    cl21454
    Location:61 → 163
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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